Description

Book Synopsis

An Easy-to-Use Research Tool for Algorithm Testing and Development

Before the SeqAn project, there was clearly a lack of available implementations in sequence analysis, even for standard tasks. Implementations of needed algorithmic components were either unavailable or hard to access in third-party monolithic software products. Addressing these concerns, the developers of SeqAn created a comprehensive, easy-to-use, open source C++ library of efficient algorithms and data structures for the analysis of biological sequences. Written by the founders of this project, Biological Sequence Analysis Using the SeqAn C++ Library covers the SeqAn library, its documentation, and the supporting infrastructure.

The first part of the book describes the general library design. It introduces biological sequence analysis problems, discusses the benefit of using software libraries, summarizes the design principles and goals of SeqAn, details the main programm

Table of Contents

The SeqAn Project. Library Contents. Applications. Bibliography. Index.

Biological Sequence Analysis Using the SeqAn C

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    A Hardback by Andreas Gogol-Döring, Knut Reinert

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      Book details

      Publisher CRC Press Inc
      Published 11 November 2009
      ISBN-13 9781420076233
      978-1420076233
      ISBN-10 142007623X
      Also in:
      Algorithms and data structures

      Description

      Book Synopsis

      An Easy-to-Use Research Tool for Algorithm Testing and Development

      Before the SeqAn project, there was clearly a lack of available implementations in sequence analysis, even for standard tasks. Implementations of needed algorithmic components were either unavailable or hard to access in third-party monolithic software products. Addressing these concerns, the developers of SeqAn created a comprehensive, easy-to-use, open source C++ library of efficient algorithms and data structures for the analysis of biological sequences. Written by the founders of this project, Biological Sequence Analysis Using the SeqAn C++ Library covers the SeqAn library, its documentation, and the supporting infrastructure.

      The first part of the book describes the general library design. It introduces biological sequence analysis problems, discusses the benefit of using software libraries, summarizes the design principles and goals of SeqAn, details the main programm

      Table of Contents

      The SeqAn Project. Library Contents. Applications. Bibliography. Index.

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