Description

Book Synopsis
This fully updated volume explores recently improved avenues to study urothelial carcinomas.

Table of Contents

Part I: Molecular Characterization

1. Scoring Systems for Immunohistochemistry in Urothelial Carcinoma

Mark-Sebastian Bösherz, Iryna V. Samarska, and Nadine Therese Gaisa

2. A Panel-Based Method for the Reproduction of Distinct Molecular Subtype Classifications of Muscle-Invasive Urothelial Bladder Cancer

Csilla Olah and Tibor Szarvas

3. Analysis of Mutational Signatures Using the mutSignatures R Library

Damiano Fantini and Joshua J. Meeks

4. A Drug Repurposing Pipeline Based on Bladder Cancer Integrated Proteotranscriptomics Signatures

Marika Mokou, Shaman Narayanasamy, Rafael Stroggilos, Irina-Afrodita Balaur, Antonia Vlahou, Harald Mischak, and Maria Frantzi

5. Characterization of Native COMPASS Complex in Urothelial Carcinoma Cells by Size Exclusion Chromatography

Christoph Peter, Wolfgang A. Schulz, and Patcharawalai Whongsiri

Part II: Urothelial Carcinogenesis

6. Reconstructing Phylogenetic Relationship in Bladder Cancer: A Methodological Overview

Lancelot Seillier and Martin Peifer

7. Using Sister Chromatid Exchange Assay to Detect Homologous Recombination Deficiency in Epigenetically Deregulated Urothelial Carcinoma Cells

Theodoros Rampias and Apostolos Klinakis

8. Identification of STAG2 Mutant Bladder Cancers by Immunohistochemistry

Youngrok Park, Alana Lelo, Brent Harris, Deborah L. Berry, Krysta Chaldekas, Jung-Sik Kim, and Todd Waldman

Part III: Cellular and Animal Models

9. Genome-Wide CRISPR Screening for the Identification of Therapy-Resistance-Associated Genes in Urothelial Carcinoma

Klaus Mantwill and Roman Nawroth

10. Tissue Slice Culture and Analysis of Tumor-Associated Hyaluronan in Urothelial Carcinoma

William Donelan, Paul L. Crispen, and Sergei Kusmartsev

Part IV: Biomarkers

11. NGS-Based Tumor-Informed Analysis of Circulating Tumor DNA

Iver Nordentoft, Karin Birkenkamp-Demtröder, and Lars Dyrskjøt

12. Considering the Effects of Modern Point-of-Care Urine Biomarker Assays in Follow-Up of Patients with High-Risk Non-Muscle Invasive Bladder Cancer

Thorsten H. Ecke, Natalya Benderska-Söder, Ekkehardt Bismarck, Bas W.G. van Rhijn, Tilman Todenhöfer, and Bernd J. Schmitz-Dräger

13. Simplex Droplet Digital PCR Assays for the Detection of TERT Promoter Mutations in Urine Samples for the Non-Invasive Diagnosis of Urothelial Cancer

Maria Zvereva, Md Ismail Hosen, Nathalie Forey, Mahdi Sheikh, Caroline Kannengiesser, Ibrahima Ba, Arnaud Manel, Emmanuel Vian, and Florence Le Calvez-Kelm

14. Predictive Biomarkers of Response to Neoadjuvant Therapy in Muscle Invasive Bladder Cancer

Jussi Nikkola and Peter Black

15. Assessment of PD-L1 Status in Urothelial Cancer

Veronika Bahlinger, Arndt Hartmann, and Markus Eckstein

Part V: Therapy Development

16. Epigenetic Priming and Development of New Combination Therapy Approaches

Sarah Meneceur, Camilla M. Grunewald, Günter Niegisch, and Michèle. J. Hoffmann

17. Evaluation of FGFR Alteration Status in Urothelial Tumors

Veronika Bahlinger, Markus Eckstein, Arndt Hartmann, and Robert Stöhr

18. Antibody-Drug-Conjugates (ADC): A Novel Treatment Option in Urothelial Carcinoma

Günter Niegisch

19. Intravesical Infusion of Oncolytic Virus CG0070 in the Treatment of Bladder Cancer

Paola Grandi, Andrea Darilek, Anay Moscu, Anu Pradhan, and Roger Li

20. Analysis of ICAM-1 Expression on Bladder Carcinoma Cell Lines and Infectivity and Oncolysis by Coxsackie Virus A21

Kate Relph, Mehreen Arif, Hardev Pandha, Nicola Annels, and Guy R. Simpson

Urothelial Carcinoma

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      Description

      Book Synopsis
      This fully updated volume explores recently improved avenues to study urothelial carcinomas.

      Table of Contents

      Part I: Molecular Characterization

      1. Scoring Systems for Immunohistochemistry in Urothelial Carcinoma

      Mark-Sebastian Bösherz, Iryna V. Samarska, and Nadine Therese Gaisa

      2. A Panel-Based Method for the Reproduction of Distinct Molecular Subtype Classifications of Muscle-Invasive Urothelial Bladder Cancer

      Csilla Olah and Tibor Szarvas

      3. Analysis of Mutational Signatures Using the mutSignatures R Library

      Damiano Fantini and Joshua J. Meeks

      4. A Drug Repurposing Pipeline Based on Bladder Cancer Integrated Proteotranscriptomics Signatures

      Marika Mokou, Shaman Narayanasamy, Rafael Stroggilos, Irina-Afrodita Balaur, Antonia Vlahou, Harald Mischak, and Maria Frantzi

      5. Characterization of Native COMPASS Complex in Urothelial Carcinoma Cells by Size Exclusion Chromatography

      Christoph Peter, Wolfgang A. Schulz, and Patcharawalai Whongsiri

      Part II: Urothelial Carcinogenesis

      6. Reconstructing Phylogenetic Relationship in Bladder Cancer: A Methodological Overview

      Lancelot Seillier and Martin Peifer

      7. Using Sister Chromatid Exchange Assay to Detect Homologous Recombination Deficiency in Epigenetically Deregulated Urothelial Carcinoma Cells

      Theodoros Rampias and Apostolos Klinakis

      8. Identification of STAG2 Mutant Bladder Cancers by Immunohistochemistry

      Youngrok Park, Alana Lelo, Brent Harris, Deborah L. Berry, Krysta Chaldekas, Jung-Sik Kim, and Todd Waldman

      Part III: Cellular and Animal Models

      9. Genome-Wide CRISPR Screening for the Identification of Therapy-Resistance-Associated Genes in Urothelial Carcinoma

      Klaus Mantwill and Roman Nawroth

      10. Tissue Slice Culture and Analysis of Tumor-Associated Hyaluronan in Urothelial Carcinoma

      William Donelan, Paul L. Crispen, and Sergei Kusmartsev

      Part IV: Biomarkers

      11. NGS-Based Tumor-Informed Analysis of Circulating Tumor DNA

      Iver Nordentoft, Karin Birkenkamp-Demtröder, and Lars Dyrskjøt

      12. Considering the Effects of Modern Point-of-Care Urine Biomarker Assays in Follow-Up of Patients with High-Risk Non-Muscle Invasive Bladder Cancer

      Thorsten H. Ecke, Natalya Benderska-Söder, Ekkehardt Bismarck, Bas W.G. van Rhijn, Tilman Todenhöfer, and Bernd J. Schmitz-Dräger

      13. Simplex Droplet Digital PCR Assays for the Detection of TERT Promoter Mutations in Urine Samples for the Non-Invasive Diagnosis of Urothelial Cancer

      Maria Zvereva, Md Ismail Hosen, Nathalie Forey, Mahdi Sheikh, Caroline Kannengiesser, Ibrahima Ba, Arnaud Manel, Emmanuel Vian, and Florence Le Calvez-Kelm

      14. Predictive Biomarkers of Response to Neoadjuvant Therapy in Muscle Invasive Bladder Cancer

      Jussi Nikkola and Peter Black

      15. Assessment of PD-L1 Status in Urothelial Cancer

      Veronika Bahlinger, Arndt Hartmann, and Markus Eckstein

      Part V: Therapy Development

      16. Epigenetic Priming and Development of New Combination Therapy Approaches

      Sarah Meneceur, Camilla M. Grunewald, Günter Niegisch, and Michèle. J. Hoffmann

      17. Evaluation of FGFR Alteration Status in Urothelial Tumors

      Veronika Bahlinger, Markus Eckstein, Arndt Hartmann, and Robert Stöhr

      18. Antibody-Drug-Conjugates (ADC): A Novel Treatment Option in Urothelial Carcinoma

      Günter Niegisch

      19. Intravesical Infusion of Oncolytic Virus CG0070 in the Treatment of Bladder Cancer

      Paola Grandi, Andrea Darilek, Anay Moscu, Anu Pradhan, and Roger Li

      20. Analysis of ICAM-1 Expression on Bladder Carcinoma Cell Lines and Infectivity and Oncolysis by Coxsackie Virus A21

      Kate Relph, Mehreen Arif, Hardev Pandha, Nicola Annels, and Guy R. Simpson

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