{"product_id":"algorithms-in-computational-molecular-biology-9780470505199","title":"Algorithms in Computational Molecular Biology","description":"\u003cb\u003eBook Synopsis\u003c\/b\u003e\u003cbr\u003eThis book represents the most comprehensive and up-to-date collection of information on the topic of computational molecular biology. Bringing the most recent research into the forefront of discussion, \u003ci\u003eAlgorithms in Computational Molecular Biology\u003c\/i\u003e studies the most important and useful algorithms currently being used in the field, and provides related problems. It also succeeds where other titles have failed, in offering a wide range of information from the introductory fundamentals right up to the latest, most advanced levels of study.\u003cbr\u003e\u003cbr\u003e\u003cb\u003eTable of Contents\u003c\/b\u003e\u003cbr\u003e\u003cp\u003ePREFACE xxxi\u003c\/p\u003e \u003cp\u003eCONTRIBUTORS xxxiii\u003c\/p\u003e \u003cp\u003eI STRINGS PROCESSING AND APPLICATION TO BIOLOGICAL SEQUENCES 1\u003c\/p\u003e \u003cp\u003e1 STRING DATA STRUCTURES FOR COMPUTATIONAL MOLECULAR BIOLOGY 3\u003cbr\u003e\u003ci\u003eChristos Makris and Evangelos Theodoridis\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e2 EFFICIENT RESTRICTED-CASE ALGORITHMS FOR PROBLEMS IN COMPUTATIONAL BIOLOGY 27\u003cbr\u003e\u003ci\u003ePatricia A. Evans and H. Todd Wareham\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e3 FINITE AUTOMATA IN PATTERN MATCHING 51\u003cbr\u003e\u003ci\u003eJan Holub\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e4 NEW DEVELOPMENTS IN PROCESSING OF DEGENERATE SEQUENCES 73\u003cbr\u003e\u003ci\u003ePavlos Antoniou and Costas S. Iliopoulos\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e5 EXACT SEARCH ALGORITHMS FOR BIOLOGICAL SEQUENCES 91\u003cbr\u003e\u003ci\u003eEric Rivals, Leena Salmela, and Jorma Tarhio\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e6 ALGORITHMIC ASPECTS OF ARC-ANNOTATED SEQUENCES 113\u003cbr\u003e\u003ci\u003eGuillaume Blin, Maxime Crochemore, and Stéphane Vialette\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e7 ALGORITHMIC ISSUES IN DNA BARCODING PROBLEMS 129\u003cbr\u003e\u003ci\u003eBhaskar DasGupta, Ming-Yang Kao, and Ion Mandoiu\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e8 RECENT ADVANCES IN WEIGHTED DNA SEQUENCES 143\u003cbr\u003e\u003ci\u003eManolis Christodoulakis and Costas S. Iliopoulos\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e9 DNA COMPUTING FOR SUBGRAPH ISOMORPHISM PROBLEM AND RELATED PROBLEMS 171\u003cbr\u003e\u003ci\u003eSun-Yuan Hsieh, Chao-Wen Huang, and Hsin-Hung Chou\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003eII ANALYSIS OF BIOLOGICAL SEQUENCES 191\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e10 GRAPHS IN BIOINFORMATICS 193\u003cbr\u003e\u003ci\u003eElsa Chacko and Shoba Ranganathan\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e11 A FLEXIBLE DATA STORE FOR MANAGING BIOINFORMATICS DATA 221\u003cbr\u003e\u003ci\u003eBassam A. Alqaralleh, Chen Wang, Bing Bing Zhou, and Albert Y. Zomaya\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e12 ALGORITHMS FOR THE ALIGNMENT OF BIOLOGICAL SEQUENCES 241\u003cbr\u003e\u003ci\u003eAhmed Mokaddem and Mourad Elloumi\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e13 ALGORITHMS FOR LOCAL STRUCTURAL ALIGNMENT AND STRUCTURAL MOTIF IDENTIFICATION 261\u003cbr\u003e\u003ci\u003eSanguthevar Rajasekaran, Vamsi Kundeti, and Martin Schiller\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e14 EVOLUTION OF THE CLUSTAL FAMILY OF MULTIPLE SEQUENCE ALIGNMENT PROGRAMS 277\u003cbr\u003e\u003ci\u003eMohamed Radhouene Aniba and Julie Thompson\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e15 FILTERS AND SEEDS APPROACHES FOR FAST HOMOLOGY SEARCHES IN LARGE DATASETS 299\u003cbr\u003e\u003ci\u003eNadia Pisanti, Mathieu Giraud, and Pierre Peterlongo\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e16 NOVEL COMBINATORIAL AND INFORMATION-THEORETIC ALIGNMENT-FREE DISTANCES FOR BIOLOGICAL DATA MINING 321\u003cbr\u003e\u003ci\u003eChiara Epifanio, Alessandra Gabriele, Raffaele Giancarlo, and Marinella Sciortino\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e17 IN SILICO METHODS FOR THE ANALYSIS OF METABOLITES AND DRUG MOLECULES 361\u003cbr\u003e\u003ci\u003eVarun Khanna and Shoba Ranganathan\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003eIII MOTIF FINDING AND STRUCTURE PREDICTION 383\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e18 MOTIF FINDING ALGORITHMS IN BIOLOGICAL SEQUENCES 385\u003cbr\u003e\u003ci\u003eTarek El Falah, Mourad Elloumi, and Thierry Lecroq\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e19 COMPUTATIONAL CHARACTERIZATION OF REGULATORY REGIONS 397\u003cbr\u003e\u003ci\u003eEnrique Blanco\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e20 ALGORITHMIC ISSUES IN THE ANALYSIS OF CHIP-SEQ DATA 425\u003cbr\u003e\u003ci\u003eFederico Zambelli and Giulio Pavesi\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e21 APPROACHES AND METHODS FOR OPERON PREDICTION BASED ON MACHINE LEARNING TECHNIQUES 449\u003cbr\u003e\u003ci\u003eYan Wang, You Zhou, Chunguang Zhou, Shuqin Wang, Wei Du, Chen Zhang, and Yanchun Liang\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e22 PROTEIN FUNCTION PREDICTION WITH DATA-MINING TECHNIQUES 479\u003cbr\u003e\u003ci\u003eXing-Ming Zhao and Luonan Chen\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e23 PROTEIN DOMAIN BOUNDARY PREDICTION 501\u003cbr\u003e\u003ci\u003ePaul D. Yoo, Bing Bing Zhou, and Albert Y. Zomaya\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e24 AN INTRODUCTION TO RNA STRUCTURE AND PSEUDOKNOT PREDICTION 521\u003cbr\u003e\u003ci\u003eJana Sperschneider and Amitava Datta\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003eIV PHYLOGENY RECONSTRUCTION 547\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e25 PHYLOGENETIC SEARCH ALGORITHMS FOR MAXIMUM LIKELIHOOD 549\u003cbr\u003e\u003ci\u003eAlexandros Stamatakis\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e26 HEURISTIC METHODS FOR PHYLOGENETIC RECONSTRUCTION WITH MAXIMUM PARSIMONY 579\u003cbr\u003e\u003ci\u003eAdrien Goëffon, Jean-Michel Richer, and Jin-Kao Hao\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e27 MAXIMUM ENTROPY METHOD FOR COMPOSITION VECTOR METHOD 599\u003cbr\u003e\u003ci\u003eRaymond H.-F. Chan, Roger W. Wang, and Jeff C.-F. Wong\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003eV MICROARRAY DATA ANALYSIS 623\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e28 MICROARRAY GENE EXPRESSION DATA ANALYSIS 625\u003cbr\u003e\u003ci\u003eAlan Wee-Chung Liew and Xiangchao Gan\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e29 BICLUSTERING OF MICROARRAY DATA 651\u003cbr\u003e\u003ci\u003eWassim Ayadi and Mourad Elloumi\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e30 COMPUTATIONAL MODELS FOR CONDITION-SPECIFIC GENE AND PATHWAY INFERENCE 665\u003cbr\u003e\u003ci\u003eYu-Qing Qiu, Shihua Zhang, Xiang-Sun Zhang, and Luonan Chen\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e31 HETEROGENEITY OF DIFFERENTIAL EXPRESSION IN CANCER STUDIES: ALGORITHMS AND METHODS 691\u003cbr\u003e\u003ci\u003eRadha Krishna Murthy Karuturi\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003eVI ANALYSIS OF GENOMES 723\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e32 COMPARATIVE GENOMICS: ALGORITHMS AND APPLICATIONS 725\u003cbr\u003e\u003ci\u003eXiao Yang and Srinivas Aluru\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e33 ADVANCES IN GENOME REARRANGEMENT ALGORITHMS 749\u003cbr\u003e\u003ci\u003eMasud Hasan and M. Sohel Rahman\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e34 COMPUTING GENOMIC DISTANCES: AN ALGORITHMIC VIEWPOINT 773\u003cbr\u003e\u003ci\u003eGuillaume Fertin and Irena Rusu\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e35 WAVELET ALGORITHMS FOR DNA ANALYSIS 799\u003cbr\u003e\u003ci\u003eCarlo Cattani\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e36 HAPLOTYPE INFERENCE MODELS AND ALGORITHMS 843\u003cbr\u003e\u003ci\u003eLing-Yun Wu\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e\u003cb\u003eVII ANALYSIS OF BIOLOGICAL NETWORKS 865\u003c\/b\u003e\u003c\/p\u003e \u003cp\u003e37 UNTANGLING BIOLOGICAL NETWORKS USING BIOINFORMATICS 867\u003cbr\u003e\u003ci\u003eGaurav Kumar, Adrian P. Cootes, and Shoba Ranganathan\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e38 PROBABILISTIC APPROACHES FOR INVESTIGATING BIOLOGICAL NETWORKS 893\u003cbr\u003e\u003ci\u003eJérémie Bourdon and Damien Eveillard\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e39 MODELING AND ANALYSIS OF BIOLOGICAL NETWORKS WITH MODEL CHECKING 915\u003cbr\u003e\u003ci\u003eDragan Bosnacki, Peter A.J. Hilbers, Ronny S. Mans, and Erik P. de Vink\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e40 REVERSE ENGINEERING OF MOLECULAR NETWORKS FROM A COMMON COMBINATORIAL APPROACH 941\u003cbr\u003e\u003ci\u003eBhaskar DasGupta, Paola Vera-Licona, and Eduardo Sontag\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e41 UNSUPERVISED LEARNING FOR GENE REGULATION NETWORK INFERENCE FROM EXPRESSION DATA: A REVIEW 955\u003cbr\u003e\u003ci\u003eMohamed Elati and Céline Rouveirol\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003e42 APPROACHES TO CONSTRUCTION AND ANALYSIS OF MICRORNA-MEDIATED NETWORKS 979\u003cbr\u003e\u003ci\u003eIlana Lichtenstein, Albert Zomaya, Jennifer Gamble, and Mathew Vadas\u003c\/i\u003e\u003c\/p\u003e \u003cp\u003eINDEX 1007\u003c\/p\u003e","brand":"John Wiley \u0026 Sons Inc","offers":[{"title":"Default Title","offer_id":49525376287063,"sku":"9780470505199","price":144.0,"currency_code":"GBP","in_stock":true}],"thumbnail_url":"\/\/cdn.shopify.com\/s\/files\/1\/0817\/1739\/5799\/files\/9780470505199.jpg?v=1731860282","url":"https:\/\/bookcurl.com\/products\/algorithms-in-computational-molecular-biology-9780470505199","provider":"Book Curl","version":"1.0","type":"link"}